DiGGer-package | DiGGer experimental design generator. |
addBlock | Add a block to an objective in a DiGGer object. |
addBlock.DiGGer | Add a block to an objective in a DiGGer object. |
addBlock.Objective | Add a block to an objective in a DiGGer object. |
addBlock.Phase | Add a block to an objective in a DiGGer object. |
addObjective | Add an Objective to a DiGGer search. |
addObjective.DiGGer | Add an Objective to a DiGGer search. |
addObjective.Phase | Add an Objective to a DiGGer search. |
addPhase | Add a Phase object to a DiGGer search. |
addPhase.DiGGer | Add a Phase object to a DiGGer search. |
Block | DiGGer Block object constructor. |
corDiGGer | Function for a spatially adjusted incomplete block DiGGer design search. |
Correlation | DiGGer Correlation object constructor. |
createFactorialDF | Create a factorial treatment data frame. |
deleteBlock | Delete a Block from an objective in a DiGGer search |
deleteBlock.DiGGer | Delete a Block from an objective in a DiGGer search |
deleteBlock.Objective | Delete a Block from an objective in a DiGGer search |
deleteBlock.Phase | Delete a Block from an objective in a DiGGer search |
deleteObjective | Delete an Objective from a DiGGer search |
deleteObjective.DiGGer | Delete an Objective from a DiGGer search |
deleteObjective.Phase | Delete an Objective from a DiGGer search |
deletePhase | Delete a Phase from a Digger search. |
deletePhase.DiGGer | Delete a Phase from a Digger search. |
des.embedopr01 | Function to generate an embedded p-rep design |
desPlot | Plot a design as a matrix |
desTab | Tabulate replication levels of treatments in blocks. |
DiGGer | Constructor function for a DiGGer design. |
errcodes | DiGGer error message texts. |
facDiGGer | Function to generate a DiGGer search for a factorial design |
findblks | Generate block codes. |
getAType | Get the A-efficiency code in a DiGGer search phase |
getAType.DiGGer | Get the A-efficiency code in a DiGGer search phase |
getAType.Phase | Get the A-efficiency code in a DiGGer search phase |
getBlock | Get a Block object from a DiGGer search object. |
getBlock.DiGGer | Get a Block object from a DiGGer search object. |
getBlock.Objective | Get a Block object from a DiGGer search object. |
getBlock.Phase | Get a Block object from a DiGGer search object. |
getConcurrence | Get a Treatment-Block or Block-Treatment concurrence table summary. |
getConcurrence.DiGGer | Get a Treatment-Block or Block-Treatment concurrence table summary. |
getCorrelation | Get a Correlation object from a DiGGer search. |
getCorrelation.DiGGer | Get a Correlation object from a DiGGer search. |
getCorrelation.Objective | Get a Correlation object from a DiGGer search. |
getCorrelation.Phase | Get a Correlation object from a DiGGer search. |
getCorrelationBlock | Show the dimensions of a correlation block in a DiGGer search. |
getCorrelationBlock.DiGGer | Show the dimensions of a correlation block in a DiGGer search. |
getCorrelationBlock.Phase | Show the dimensions of a correlation block in a DiGGer search. |
getDesign | Get the matrix of design numbers from a DiGGer search. |
getDesign.DiGGer | Get the matrix of design numbers from a DiGGer search. |
getDesignLayout | Get the layout dimensions of a DiGGer design. |
getDesignLayout.DiGGer | Get the layout dimensions of a DiGGer design. |
getDups | Get the vector of duplicated treatments. |
getError | Get an error message from a DiGGer object. |
getError.DiGGer | Get an error message from a DiGGer object. |
getidsgn | Generate an initial design for a DiGGer search. |
getInitialDesign | Get the initial design used in a DiGGer search. |
getInitialDesign.DiGGer | Get the initial design used in a DiGGer search. |
getIntermediateDesign | Get the design from a DiGGer search phase. |
getIntermediateDesign.DiGGer | Get the design from a DiGGer search phase. |
getLinearCovariate | Get the linear covariate from a DiGGer objective. |
getLinearCovariate.DiGGer | Get the linear covariate from a DiGGer objective. |
getLinearCovariate.Objective | Get the linear covariate from a DiGGer objective. |
getLinearCovariate.Phase | Get the linear covariate from a DiGGer objective. |
getMaxInterchanges | Get the maximum treatment interchanges for a DiGGer search phase. |
getMaxInterchanges.DiGGer | Get the maximum treatment interchanges for a DiGGer search phase. |
getMaxInterchanges.Phase | Get the maximum treatment interchanges for a DiGGer search phase. |
getNumberOfBlocks | Get the number of block factors in a DiGGer objective |
getNumberOfBlocks.DiGGer | Get the number of block factors in a DiGGer objective |
getNumberOfBlocks.Objective | Get the number of block factors in a DiGGer objective |
getNumberOfBlocks.Phase | Get the number of block factors in a DiGGer objective |
getNumberOfObjectives | Get the number of objectives in a DiGGer search phase. |
getNumberOfObjectives.DiGGer | Get the number of objectives in a DiGGer search phase. |
getNumberOfObjectives.Phase | Get the number of objectives in a DiGGer search phase. |
getNumberOfSearchPhases | Get the number of search phases in a DiGGer search. |
getNumberOfSearchPhases.DiGGer | Get the number of search phases in a DiGGer search. |
getNumberOfTreatments | Get the number of treatments in a DiGGer search. |
getNumberOfTreatments.DiGGer | Get the number of treatments in a DiGGer search. |
getObjective | Get an objective from a DiGGer search. |
getObjective.DiGGer | Get an objective from a DiGGer search. |
getObjective.Phase | Get an objective from a DiGGer search. |
getObjectiveWeight | Get the weight used for a DiGGer objective. |
getObjectiveWeight.DiGGer | Get the weight used for a DiGGer objective. |
getObjectiveWeight.Objective | Get the weight used for a DiGGer objective. |
getObjectiveWeight.Phase | Get the weight used for a DiGGer objective. |
getPhase | Get a Phase object from a DiGGer search. |
getPhase.DiGGer | Get a Phase object from a DiGGer search. |
getReplicateLayout | Get the dimensions of a DiGGer replicate. |
getReplicateLayout.DiGGer | Get the dimensions of a DiGGer replicate. |
getSearchIntensity | Get the search intensity in a DiGGer search phase. |
getSearchIntensity.DiGGer | Get the search intensity in a DiGGer search phase. |
getSearchIntensity.Phase | Get the search intensity in a DiGGer search phase. |
getSeeds | Get the initial Random Number Generator seeds. |
getSeeds.DiGGer | Get the initial Random Number Generator seeds. |
getSwapBlock | Get swap block dimensions in a DiGGer search phase. |
getSwapBlock.DiGGer | Get swap block dimensions in a DiGGer search phase. |
getSwapBlock.Phase | Get swap block dimensions in a DiGGer search phase. |
getTargetAValue | Get the target A-measure for a DiGGer search phase. |
getTargetAValue.DiGGer | Get the target A-measure for a DiGGer search phase. |
getTargetAValue.Phase | Get the target A-measure for a DiGGer search phase. |
getTreatmentVarianceRatio | Get the treatment variance ratio from a DiGGer search. |
getTreatmentVarianceRatio.DiGGer | Get the treatment variance ratio from a DiGGer search. |
ibDiGGer | Function to search for incomplete block designs using DiGGer. |
indi | Form an indicator matrix. |
nurseryDiGGer | Function to generate a DiGGer search replicated design with high check treatment frequencies |
Objective | Constructor function for a DiGGer Objective. |
Phase | DiGGer Phase object constructor function. |
plot | Plot DiGGer design labels. |
plot.DiGGer | Plot DiGGer design labels. |
ppage | View an object using page. |
prDiGGer | Function to generate a DiGGer search for a p-rep design |
print.Block | Print a Block object. |
print.Correlation | Print a DiGGer Correlation object. |
print.DiGGer | Print a DiGGer search object. |
print.Objective | Print a DiGGer Objective |
print.Phase | Print a DiGGer Phase. |
printDiGGer | Print a DiGGer input file. |
printDiGGer.DiGGer | Print a DiGGer input file. |
r2dDiGGer | Function for strict two dimensional replicates from a DiGGer design search. |
rcDiGGer | Function to search for a row-column design using DiGGer. |
run | Run a DiGGer search. |
run.DiGGer | Run a DiGGer search. |
setAType | Set the type of A-Measure for a DiGGer search phase. |
setAType.DiGGer | Set the type of A-Measure for a DiGGer search phase. |
setAType.Phase | Set the type of A-Measure for a DiGGer search phase. |
setBlock | Modify the parameters for a Block object. |
setBlock.DiGGer | Modify the parameters for a Block object. |
setBlock.Objective | Modify the parameters for a Block object. |
setBlock.Phase | Modify the parameters for a Block object. |
setCorrelation | Modify a Correlation object in a DiGGer search. |
setCorrelation.DiGGer | Modify a Correlation object in a DiGGer search. |
setCorrelation.Objective | Modify a Correlation object in a DiGGer search. |
setCorrelation.Phase | Modify a Correlation object in a DiGGer search. |
setCorrelationBlock | Set the template for blocks of correlated error. |
setCorrelationBlock.DiGGer | Set the template for blocks of correlated error. |
setCorrelationBlock.Phase | Set the template for blocks of correlated error. |
setInitialDesign | Set an Initial Design for a DiGGer search. |
setInitialDesign.DiGGer | Set an Initial Design for a DiGGer search. |
setLinearCovariate | Set the Linear Covariate in a DiGGer search objective. |
setLinearCovariate.DiGGer | Set the Linear Covariate in a DiGGer search objective. |
setLinearCovariate.Objective | Set the Linear Covariate in a DiGGer search objective. |
setLinearCovariate.Phase | Set the Linear Covariate in a DiGGer search objective. |
setMaxInterchanges | Set the maximum number of treatment interchanges in a DiGGer search Phase. |
setMaxInterchanges.DiGGer | Set the maximum number of treatment interchanges in a DiGGer search Phase. |
setMaxInterchanges.Phase | Set the maximum number of treatment interchanges in a DiGGer search Phase. |
setObjective | Set an Objective to optimise in a DiGGer search |
setObjective.DiGGer | Set an Objective to optimise in a DiGGer search |
setObjective.Phase | Set an Objective to optimise in a DiGGer search |
setObjectiveWeight | Set the scaling weight for a DiGGer Objective. |
setObjectiveWeight.DiGGer | Set the scaling weight for a DiGGer Objective. |
setObjectiveWeight.Objective | Set the scaling weight for a DiGGer Objective. |
setObjectiveWeight.Phase | Set the scaling weight for a DiGGer Objective. |
setPhase | Modify a DiGGer search Phase. |
setPhase.DiGGer | Modify a DiGGer search Phase. |
setSearchIntensity | Set the Search Intensity for a DiGGer search phase. |
setSearchIntensity.DiGGer | Set the Search Intensity for a DiGGer search phase. |
setSearchIntensity.Phase | Set the Search Intensity for a DiGGer search phase. |
setSeeds | Set the Random Number Generator Seeds for a DiGGer search. |
setSeeds.DiGGer | Set the Random Number Generator Seeds for a DiGGer search. |
setSwapBlock | Set the template for the swap blocks in a DiGGer search Phase. |
setSwapBlock.DiGGer | Set the template for the swap blocks in a DiGGer search Phase. |
setSwapBlock.Phase | Set the template for the swap blocks in a DiGGer search Phase. |
setTargetAValue | Set the target A-value. |
setTargetAValue.DiGGer | Set the target A-value. |
setTargetAValue.Phase | Set the target A-value. |
setTreatmentVarianceRatio | Set the treatment variance ratio. |
setTreatmentVarianceRatio.DiGGer | Set the treatment variance ratio. |
summary | Summarise the DiGGer search. |
summary.DiGGer | Summarise the DiGGer search. |
ttab | Produce a table of frequencies in an object. |